Package: SIMplyBee
Type: Package
Title: 'AlphaSimR' Extension for Simulating Honeybee Populations and
        Breeding Programmes
Version: 0.4.1
Authors@R: c(
  person("Jana", "Obšteter", email = "obsteter.jana@gmail.com",
  role = c("aut", "cre"), comment = c(ORCID = "0000-0003-1511-3916")),
  person("Laura", "Strachan", role = "aut", 
  comment = c(ORCID = "0000-0002-2569-0250")),
  person("Jernej", "Bubnič", role = "aut", 
  comment = c(ORCID = "0000-0003-1362-3736")),
  person("Gregor", "Gorjanc", role = c("aut"), 
  comment = c(ORCID = "0000-0001-8008-2787")))
Description: An extension of the 'AlphaSimR' package
        (<https://cran.r-project.org/package=AlphaSimR>) for stochastic
        simulations of honeybee populations and breeding programmes.
        'SIMplyBee' enables simulation of individual bees that form a
        colony, which includes a queen, fathers (drones the queen mated
        with), virgin queens, workers, and drones. Multiple colony can
        be merged into a population of colonies, such as an apiary or a
        whole country of colonies. Functions enable operations on
        castes, colony, or colonies, to ease 'R' scripting of whole
        populations. All 'AlphaSimR' functionality with respect to
        genomes and genetic and phenotype values is available and
        further extended for honeybees, including haplo-diploidy,
        complementary sex determiner locus, colony events (swarming,
        supersedure, etc.), and colony phenotype values.
URL: https://github.com/HighlanderLab/SIMplyBee
License: MIT + file LICENSE
Encoding: UTF-8
Imports: methods, R6, stats, utils, extraDistr (>= 1.9.1), RANN, Rcpp
        (>= 0.12.7)
Depends: R (>= 3.3.0), AlphaSimR (>= 1.5.3)
LinkingTo: Rcpp, RcppArmadillo (>= 0.7.500.0.0), BH
RoxygenNote: 7.3.2
Suggests: rmarkdown, knitr, ggplot2, testthat (>= 3.0.0), Matrix
Config/testthat/edition: 3
Config/Needs/website: tidyverse/tidytemplate
VignetteBuilder: knitr
Repository: https://highlanderlab.r-universe.dev
Date/Publication: 2024-09-19 06:02:22 UTC
RemoteUrl: https://github.com/highlanderlab/SIMplyBee
RemoteRef: HEAD
RemoteSha: 01a56eebb9efbb23e3e6113cbf9fdb3b99504bf9
NeedsCompilation: yes
Packaged: 2026-06-20 07:47:14 UTC; root
Author: Jana Obšteter [aut, cre] (ORCID:
    <https://orcid.org/0000-0003-1511-3916>),
  Laura Strachan [aut] (ORCID: <https://orcid.org/0000-0002-2569-0250>),
  Jernej Bubnič [aut] (ORCID: <https://orcid.org/0000-0003-1362-3736>),
  Gregor Gorjanc [aut] (ORCID: <https://orcid.org/0000-0001-8008-2787>)
Maintainer: Jana Obšteter <obsteter.jana@gmail.com>